{"entryType":"UniProtKB reviewed (Swiss-Prot)","primaryAccession":"P69474","secondaryAccessions":["P19521"],"uniProtkbId":"CAPSD_CGMVS","entryAudit":{"firstPublicDate":"2005-03-15","lastAnnotationUpdateDate":"2026-06-10","lastSequenceUpdateDate":"2007-01-23","entryVersion":66,"sequenceVersion":2},"annotationScore":2.0,"organism":{"scientificName":"Cucumber green mottle mosaic virus (strain watermelon SH)","commonName":"CGMMV","taxonId":12236,"lineage":["Viruses","Riboviria","Orthornavirae","Kitrinoviricota","Alsuviricetes","Martellivirales","Virgaviridae","Tobamovirus","Tobamovirus viridimaculae","Cucumber green mottle mosaic virus"]},"organismHosts":[{"scientificName":"Citrullus","taxonId":3653},{"scientificName":"Cucumis sativus","commonName":"Cucumber","taxonId":3659},{"scientificName":"Lagenaria siceraria","commonName":"Bottle gourd","synonyms":["Lagenaria leucantha"],"taxonId":3668}],"proteinExistence":"3: Inferred from homology","proteinDescription":{"recommendedName":{"fullName":{"value":"Capsid protein"}},"alternativeNames":[{"fullName":{"value":"Coat protein"}}]},"genes":[{"geneName":{"value":"CP"}}],"comments":[{"texts":[{"value":"Capsid protein self-assembles to form rod-shaped virions about 18 nm in diameter with a central canal enclosing the viral genomic RNA"}],"commentType":"FUNCTION"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000305"}],"value":"Virion","id":"SL-0274"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000305"}],"value":"Belongs to the virgaviridae capsid protein family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Initiator methionine","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"Removed; by host","evidences":[{"evidenceCode":"ECO:0000250"}]},{"type":"Chain","location":{"start":{"value":2,"modifier":"EXACT"},"end":{"value":161,"modifier":"EXACT"}},"description":"Capsid protein","featureId":"PRO_0000144928"},{"type":"Modified residue","location":{"start":{"value":2,"modifier":"EXACT"},"end":{"value":2,"modifier":"EXACT"}},"description":"N-acetylalanine; by host","evidences":[{"evidenceCode":"ECO:0000250"}]}],"keywords":[{"id":"KW-0007","category":"PTM","name":"Acetylation"},{"id":"KW-0167","category":"Cellular component","name":"Capsid protein"},{"id":"KW-1139","category":"Cellular component","name":"Helical capsid protein"},{"id":"KW-1185","category":"Technical term","name":"Reference proteome"},{"id":"KW-0946","category":"Cellular component","name":"Virion"}],"references":[{"referenceNumber":1,"citation":{"id":"1856687","citationType":"journal article","authors":["Ugaki M.","Tomiyama M.","Kakutani T.","Hidaka S.","Kiguchi T.","Nagata R.","Sato T.","Motoyoshi F.","Nishiguchi M."],"citationCrossReferences":[{"database":"PubMed","id":"1856687"},{"database":"DOI","id":"10.1099/0022-1317-72-7-1487"}],"title":"The complete nucleotide sequence of cucumber green mottle mosaic virus (SH strain) genomic RNA.","publicationDate":"1991","journal":"J. Gen. Virol.","firstPage":"1487","lastPage":"1495","volume":"72"},"referencePositions":["NUCLEOTIDE SEQUENCE [GENOMIC RNA]"]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"D12505","properties":[{"key":"ProteinId","value":"BAA02071.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_RNA"}]},{"database":"PIR","id":"JQ1160","properties":[{"key":"EntryName","value":"VCTMSH"}]},{"database":"RefSeq","id":"NP_044580.1","properties":[{"key":"NucleotideSequenceId","value":"NC_001801.1"}]},{"database":"SMR","id":"P69474","properties":[{"key":"Description","value":"-"}]},{"database":"GeneID","id":"1494062","properties":[{"key":"Description","value":"-"}]},{"database":"KEGG","id":"vg:1494062","properties":[{"key":"Description","value":"-"}]},{"database":"Proteomes","id":"UP000008447","properties":[{"key":"Component","value":"Segment"}]},{"database":"GO","id":"GO:0019029","properties":[{"key":"GoTerm","value":"C:helical viral capsid"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-KW"}]},{"database":"GO","id":"GO:0005198","properties":[{"key":"GoTerm","value":"F:structural molecule activity"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"Gene3D","id":"1.20.120.70","properties":[{"key":"EntryName","value":"Tobacco mosaic virus-like, coat protein"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR001337","properties":[{"key":"EntryName","value":"TMV-like_coat"}]},{"database":"InterPro","id":"IPR036417","properties":[{"key":"EntryName","value":"TMV-like_coat_sf"}]},{"database":"Pfam","id":"PF00721","properties":[{"key":"EntryName","value":"TMV_coat"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF47195","properties":[{"key":"EntryName","value":"TMV-like viral coat proteins"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MAYNPITPSKLIAFSASYVPVRTLLNFLVASQGTAFQTQAGRDSFRESLSALPSSVVDINSRFPDAGFYAFLNGPVLRPIFVSLLSSTDTRNRVIEVVDPSNPTTAESLNAVKRTDDASTAARAEIDNLIESISKGFDVYDRASFEAAFSVVWSEATTSKA","length":161,"molWeight":17394,"crc64":"2119F359A096D925","md5":"90021D5071AD08BEB0F73CE844A1353F"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Initiator methionine":1,"Chain":1,"Modified residue":1},"uniParcId":"UPI00000002E7"}}